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Fulton County District Attorney Fani Willis looks on during a hearing on the Georgia election interference case in Atlanta on March 1.Alex Slitz/The Associated Press

The Georgia judge overseeing Donald Trump’s trial on charges of trying to overturn his election defeat said on Friday that lead prosecutor Fani Willis can remain on the case, but a deputy with whom she had a personal relationship stepped down in keeping with the judge’s order.

Nathan Wade, the special counsel hired for the case, resigned on Friday in an open letter to Willis.

Judge Scott McAfee’s ruling was a blow to the Republican former U.S. president, who seeks to unseat Democratic President Joe Biden in a Nov. 5 election. Mr. Trump has sought to delay trials in the four criminal cases he faces until after the election.

Mr. Trump is accused in the Georgia case of illegally pressuring state officials to overturn his loss to Mr. Biden there in the 2020 presidential election.

Justice McAfee’s decision caps a tumultuous two months for Ms. Willis, the Fulton County district attorney whose romantic relationship with Mr. Wade, the special prosecutor she appointed to lead the case, was disclosed in a January court filing by a Trump co-defendant.

It also ends three months of contentious litigation and evidentiary hearings over the relationship that effectively paused the rest of the case, though Justice McAfee has yet to set a trial date.

“I am offering my resignation in the interest of democracy, in dedication to the American public and to move this case forward as quickly as possible,” Mr. Wade wrote, according to letters provided by the District Attorney’s office.

Defence lawyers said the relationship posed a conflict of interest and improperly enriched Ms. Willis and Mr. Wade, who vacationed together while Mr. Wade was drawing a government salary.

Justice McAfee found the relationship did not pose a conflict of interest but said it created “a significant appearance of impropriety” that required either Ms. Willis or Mr. Wade to step aside.

Mr. Trump’s lawyer Steve Sadow said in a statement that he respected the judge’s ruling but believed it did “not afford appropriate significance to the prosecutorial misconduct of Willis and Wade.”

Mr. Trump has pleaded not guilty in all the cases against him. He has so far been successful in delaying the start of any trial as he seeks to return to the White House.

One in four self-identified Republicans and about half of independents said they would not vote for Mr. Trump if he was convicted of a felony crime by a jury, according to a February Reuters/Ipsos poll. That would be a significant liability in a race where opinion polls show Mr. Trump and Mr. Biden essentially tied.

The U.S. Supreme Court has agreed to review Mr. Trump’s bid for presidential immunity in a federal election interference case in Washington, which could delay that trial until after the election.

The judge in Mr. Trump’s upcoming trial in New York on charges related to hush-money payments to a porn star during his 2016 campaign is weighing postponing the March 25 scheduled trial start after federal prosecutors turned over a mountain of new evidence.

Ms. Willis and Mr. Wade testified that their relationship did not begin until after Mr. Wade was hired. Prosecutors argued the affair was irrelevant because it did not harm the defendants.

Defence lawyers accused the prosecutors of lying to the court, saying the relationship began before Mr. Wade was hired. In court papers filed on Feb. 23, Mr. Trump’s lawyer cited location data from Mr. Wade’s cellphone suggesting he made numerous late-night visits to Ms. Willis’ home before she appointed him.

Mr. Trump is also under indictment in Florida over his handling of classified documents upon leaving office. The judge overseeing that case is weighing Mr. Trump’s bid to move his May 20 trial date.

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